Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 189 a.a., type II secretion system protein GspM from Ralstonia sp. UNC404CL21Col

 Score = 62.4 bits (150), Expect = 4e-15
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 1/151 (0%)

Query: 2   DNLRAWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVK 61
           D    +W     RE++I+  G V L++ + Y  +W P    +    + L   +  L  ++
Sbjct: 27  DAATTFWMQREPRERRILAGGGVVLLLVIVYLVLWEPAFEGQRRIEKALPQMRTQLAEME 86

Query: 62  QTANKIAGLKQSGAKPTMSGS-LSSVVNQTAGSYGLVITRMQPQGDKIQVWMDDVPFDAL 120
               +  GL    A P   G+ L   +  +  ++GL  TRM   G+ +QV +D VPF A+
Sbjct: 87  TLGQEARGLSAIAAAPVPRGAELQQALTASLTNHGLKATRMAMSGESVQVQLDKVPFGAV 146

Query: 121 LNYLSDLVQKKGLSLESVDLAEADAPGYVKV 151
             +L ++ Q + + +   ++    A   V V
Sbjct: 147 AEWLQEVRQAQRMKVIDTNIKYVGATALVNV 177