Pairwise Alignments

Query, 395 a.a., general secretion pathway protein L (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., general secretion pathway protein L (RefSeq) from Shewanella amazonensis SB2B

 Score =  557 bits (1436), Expect = e-163
 Identities = 276/396 (69%), Positives = 337/396 (85%), Gaps = 1/396 (0%)

Query: 1   MSERLFIRLGRTAEQACSWLVWSEQEQEIIASGELANAQGLSTLTERAGNRPIDVLVPAS 60
           +SERLFIRLG  A+ +CSWL+WSEQEQEIIASGEL  A+ L++LTERAGNRP+D+LVPAS
Sbjct: 3   VSERLFIRLGTKAQDSCSWLIWSEQEQEIIASGELPGAESLASLTERAGNRPVDILVPAS 62

Query: 61  AMTLTSVNLPEKGQRQALKALPFMLEESIADDVDAMHFTVGPRNGDALSVVAVAHEQMQT 120
           +MTLT ++LPEKGQRQALKALPFMLEE+IA DVD MHF VG R+G+ LSV AVAHEQMQT
Sbjct: 63  SMTLTEIHLPEKGQRQALKALPFMLEENIAQDVDDMHFVVGSRDGERLSVAAVAHEQMQT 122

Query: 121 WLSCLADAGLKVKRIVPDCLALPLQECQWAAMRFGNELLLRTGLGTGHSLPLPWLPVAMK 180
           WL  LADAGLK +R+VPDCLALPL+ C+WAAM  G ELL+RTG G+G +LP  WLPVA+ 
Sbjct: 123 WLGWLADAGLKARRLVPDCLALPLESCEWAAMLMGQELLVRTGKGSGLNLPQDWLPVALP 182

Query: 181 QLTAQAEEL-SVASYSEMQLDGVELKPQPLDLPMLVLARGILHAPINLLSGVYTPKREYS 239
            + A  +   SVA+Y++M + G ++KPQ LDLPMLVLARG+L AP+NLL+G Y PKRE S
Sbjct: 183 MMLADKDTAPSVATYNDMNIPGADVKPQTLDLPMLVLARGVLQAPMNLLTGSYKPKRELS 242

Query: 240 KHLLQWKNAAIVLAVAIVLSLVNKGLTIHQVNGQIADLKAQSEAIYQQVVPGNTRIVNLR 299
           KHLLQWK+A IV+AVA++LSLVNKGLTI+QV  Q   LKA+SEAIY+QVVPG++RIVNLR
Sbjct: 243 KHLLQWKSALIVVAVALLLSLVNKGLTIYQVGTQAEVLKAESEAIYRQVVPGSSRIVNLR 302

Query: 300 SQMESQLRSLQGQGSGAEFFSMLAGLQDAFKQVPELKPNSLRFESARNEIRMQVTAKNYA 359
           SQ+++++R L G GSGAEFFSML  L+ +F  VPELKPNSLRF+SAR+EIRMQVTAK+YA
Sbjct: 303 SQLDNEVRKLSGSGSGAEFFSMLQRLKTSFAAVPELKPNSLRFDSARSEIRMQVTAKDYA 362

Query: 360 QIEKFKEIVGRRFQMDGGTMNSGEDQVTSTLTLRSK 395
           QIEKFKE+VG+ F+++ G MNS ++ VTSTLTLRS+
Sbjct: 363 QIEKFKELVGKDFELEAGAMNSSDEAVTSTLTLRSR 398