Pairwise Alignments

Query, 122 a.a., hypothetical URI domain endonuclease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 140 a.a., excinuclease ABC subunit C (RefSeq) from Shewanella sp. ANA-3

 Score =  200 bits (509), Expect = 5e-57
 Identities = 107/140 (76%), Positives = 111/140 (79%), Gaps = 18/140 (12%)

Query: 1   MIEAANSTPSASPKQGASQAQA------------------VTSEQGATSEIVQASAWYLY 42
           MIEAANSTPSASPK+GASQ QA                  VTSEQGATSEI Q S WYLY
Sbjct: 1   MIEAANSTPSASPKKGASQTQAANQAQLSSKPEALGAEQAVTSEQGATSEIEQVSMWYLY 60

Query: 43  LICCANGHLYTGITTDVARRFNEHQSNGPKTAKYLRGKGPLTLMYQEQVGSQGDALRREI 102
           LI CANGHLYTGITTDVARRFNEHQS+ PK AKYLRGKGPLTLMYQE VG++ DALRREI
Sbjct: 61  LIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQEPVGTRSDALRREI 120

Query: 103 AVKKLSRAQKLVLIESAEHR 122
           AVKKLSR QKL LIESAEHR
Sbjct: 121 AVKKLSRNQKLALIESAEHR 140