Pairwise Alignments

Query, 213 a.a., formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., formate dehydrogenase subunit gamma from Vibrio cholerae E7946 ATCC 55056

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 16/216 (7%)

Query: 1   MSKHNKQEMVVRHKLFDRICHWFIVAVGLVTFLTGFSFFY---------PSFQWLGAIAG 51
           +SK      + R    DR  HW +    L    +G    Y         PS  W   I  
Sbjct: 117 LSKPRTGRKLNRWSRSDRALHWSMAFTFLTLAFSGLMLVYGKHFLKPYIPSELWGWIIYA 176

Query: 52  TPQLAKFIHPIAGLLMCLPLMLMLVRYYHHNKWEKHDLAWMLAIKDVMFENEEKIPPIGH 111
             Q   ++ P+  +L    LM +L++++  + + K D+ W + +  ++ + +   P  G 
Sbjct: 177 AKQYHNYMGPLFFIL----LMFVLLKWWRKSIFNKVDVQWFMKLGGMVGKYKGTHPSAGF 232

Query: 112 YNPGQKVLFRAFVLTSITLTVTGFIMWQPYFAPYFSATVVGWAIVLHAISALIMLMFVMV 171
            N G+K ++   ++      ++G ++  P F    +   +  + ++H +SALI++   + 
Sbjct: 233 SNAGEKAIYWLLIVFGTFAAISGLVLDFPIFGQ--TRRDMELSNLIHMLSALILICGFIF 290

Query: 172 HFWMASW-VEGSITGMLYGKVSKAWCRKHHPLMLDE 206
           H ++  + +EG++ GM+ GKV + W ++HH L  +E
Sbjct: 291 HIYIGLFGMEGALEGMVTGKVDETWAKEHHDLWYEE 326