Pairwise Alignments

Query, 513 a.a., histidine ammonia-lyase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 516 a.a., histidine ammonia-lyase from Rahnella sp. WP5

 Score =  561 bits (1447), Expect = e-164
 Identities = 299/502 (59%), Positives = 369/502 (73%), Gaps = 5/502 (0%)

Query: 9   LTPGSLSLAQLREISRHKLTLELAPEAINDINISAQIVQKVLDEGRTVYGINTGFGLLAN 68
           L PG + L  LR+I +  + LELA EA   +  S + V ++++ G+ VYGINTGFG LA 
Sbjct: 13  LQPGHVDLPMLRKIYQGNVRLELAEEARAGVLASQETVTRIVESGKVVYGINTGFGKLAQ 72

Query: 69  TKIAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLIS 128
           T+I    L  LQR++VLSH+ G G+ + D  VRL+M  K+ SLSRG SGIR+EVI+ LI+
Sbjct: 73  TRIPAARLAELQRNLVLSHSVGIGKDLADNVVRLVMATKVLSLSRGHSGIRIEVIDALIT 132

Query: 129 LVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSYQGQIISAAEGLEIAGLKPID 188
           L NA VYPC+PEKGSVGASGDLAPLAH+ L L+GEG+++ QG+ +SA EGL  AGLKP +
Sbjct: 133 LFNAGVYPCIPEKGSVGASGDLAPLAHLSLMLIGEGQVTAQGEKMSATEGLATAGLKPFE 192

Query: 189 LAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVIGAMSVEAAMGSRSPFDPRIHAAR 248
           L  KEGLALLNGTQ ST+LAL GLF AE +F+A  V GA+S+EA  GS  P D RIH AR
Sbjct: 193 LGPKEGLALLNGTQVSTSLALSGLFEAERVFSAGLVAGALSLEAIKGSVKPLDARIHEAR 252

Query: 249 GQKGQIDSAMVFRYLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQIRQAAEVLA 308
           GQ+GQI  A     +L   S+I  SHA+C +VQDPYS+RC PQV+GACL  +  AA +L 
Sbjct: 253 GQQGQIGVAAALSEIL-RGSDIVTSHADCGRVQDPYSIRCVPQVMGACLDNLHHAARILR 311

Query: 309 TEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAELGAIAERRIALLIDSSL 368
            EAN  +DNPLVF + GD+ISGGNFHAEPVA AAD +A+A+AE+GAI+ERR+ALL+D+ L
Sbjct: 312 IEANAASDNPLVFSENGDVISGGNFHAEPVAFAADIIALAVAEIGAISERRMALLLDTGL 371

Query: 369 SKLPPFLVKNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTSANQEDHVSMATFAA 428
           S LP FLV +GGVNSGFMIAQVTAAALASENK+ AHP SVDSLPTSANQEDHVSMAT+AA
Sbjct: 372 SGLPAFLVNDGGVNSGFMIAQVTAAALASENKSLAHPGSVDSLPTSANQEDHVSMATYAA 431

Query: 429 RRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSKAVAQAKAELREVVAYYDKDRYFAPD 488
           RRL DM  NT  V+ IE +AAAQG+DF  PL  S  +      +RE VA+ +KDR  APD
Sbjct: 432 RRLGDMCFNTSVVVGIEAMAAAQGIDFLRPLQSSATLENEMKAIRENVAFLEKDRLMAPD 491

Query: 489 IEA----ATDLLYTASFNAYLP 506
           +E     A+   + A+  A LP
Sbjct: 492 VEMMRLWASREHWPAAIEALLP 513