Pairwise Alignments

Query, 513 a.a., histidine ammonia-lyase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 542 a.a., histidine ammonia-lyase from Herbaspirillum seropedicae SmR1

 Score =  314 bits (805), Expect = 4e-90
 Identities = 194/520 (37%), Positives = 295/520 (56%), Gaps = 32/520 (6%)

Query: 13  SLSLAQLREISRHK-LTLELAPEAINDINISAQIVQKVL--DEGRTVYGINTGFGLLANT 69
           +L+ AQ+  ++R   L + LA  +   +  S   ++     DE   +Y  NTG GLL +T
Sbjct: 10  NLTAAQVVSVARAPHLKVALADSSRAALKQSRDYIESTWMHDEAPMMYSFNTGVGLLKDT 69

Query: 70  KIAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLISL 129
           +I  E ++L Q  ++ +H+AG G+   +   R  M+L+ N+ +  +S  R+EV++ L++ 
Sbjct: 70  RIKVEHIELFQTQLIRAHSAGIGEAFSEEVSRATMLLRANAFASNYSAPRVEVVDRLLAF 129

Query: 130 VNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLG--EGEMSYQGQIISAAEGLEIAGLKPI 187
           +NA ++P +P+KGSVGASGDLAPLA++   + G  E E+ YQGQ + A E +E AG+ P+
Sbjct: 130 INAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAEVMYQGQRMRATEAIEQAGIGPV 189

Query: 188 --DLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVIGAMSVEAAMGSRSPFDPRIH 245
             DL AK+  AL+NG  AS A+A+     A  L   + +   +++EA     S FDPRI 
Sbjct: 190 KFDLKAKDASALINGCTASLAVAILAAHDARHLLTDACLSLGLTLEAMRAEMSAFDPRIQ 249

Query: 246 AARGQKGQIDSAMVFRYLLGEESEIS--------------LSHANCEKVQDPYSLRCQPQ 291
            AR   GQI +A V R LL   +  +                 A   ++QD YSLRC PQ
Sbjct: 250 QARPHAGQIKTAEVIRTLLQGSTRTTHAARAVQLPDELRRTDIAYTARIQDVYSLRCAPQ 309

Query: 292 VLGACLTQIRQAAEVLATEANGVTDNPLVFQ----DTGDIISGGNFHAEPVAMAADNLAI 347
           V G     +     ++  E N  TDNPL+F     +  +IISGGNFH + +A A D LA+
Sbjct: 310 VYGPVFDALDYIDTIIEKETNSATDNPLIFHKEEGEGFEIISGGNFHGQYLAQAMDLLAM 369

Query: 348 AIAELGAIAERRIALLIDSSLSKLPPFLVKNG--GVNSGFMIAQVTAAALASENKTYAHP 405
           AI +LG+I ERRIA LID +LS   P  + +G  GVN+G+ + Q + ++L  EN+T   P
Sbjct: 370 AITDLGSICERRIARLIDPTLSWGLPRNLMSGVRGVNTGYPVVQCSMSSLVMENRTLCMP 429

Query: 406 ASVDSLPTSANQEDHVSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSKAV 465
            SVDS+P+  N EDH+S +T+ AR+   + +NT+ ++ +E+L AAQ L     L     +
Sbjct: 430 GSVDSIPSKGNSEDHISNSTWCARKAMTVVQNTQYIVGVEMLLAAQALTMTEALLKDFVL 489

Query: 466 AQ----AKAEL-REVVAYYDKDRYFAPDIEAATDLLYTAS 500
            Q    A AE+ R++ A  D DR+F  D++AA   + + S
Sbjct: 490 GQGTQAAYAEIRRQIPACLDGDRWFHDDVQAAHGFVVSGS 529