Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., HTH-type transcriptional regulator, GntR family from Phaeobacter inhibens DSM 17395

 Score =  117 bits (292), Expect = 3e-31
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 1/222 (0%)

Query: 6   FAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQGLG 65
           F +++  +   I+   W +   +P+E  LAE F C+R T  RAL EL D G+++R +  G
Sbjct: 22  FQDVRDEVLKRIQDRVWGQGDLLPTEQDLAEEFGCARATVNRALRELADRGIIDRKRKSG 81

Query: 66  TFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPVFHS 125
           T VA    + + L I      ++DR   Y    +  E++ A   +A  L L   +PV H 
Sbjct: 82  TRVAVLPVKQAKLEITLTRQLVEDRNAIYRYALVHREEIPAPGWLASQLQLAADTPVLHI 141

Query: 126 ILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQVAPLTEAHHTIEAIIASS 185
             +H     P Q E+R++N A  P     DFS   P+E+L    P + A  +  AI A +
Sbjct: 142 RAMHYGDNQPFQFEDRWINIAAVPSVAEADFSVVGPNEWLLAEVPFSTAELSFGAIAADA 201

Query: 186 ELQQRLAIPATEPCLQISRRTWSRQGVVSFAKL-VHPGSRFK 226
            L + LA P   P  Q+ R TW +   V+F ++  HPG + +
Sbjct: 202 ALAEYLACPIAAPLFQMERTTWFQAQPVTFVRMSFHPGYQMR 243