Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 261 a.a., GntR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 3/228 (1%)

Query: 2   ATPKFAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERS 61
           A P +  IK  +   I SG +   + +PSE  L E F  SR+T R+AL +L + G++ R 
Sbjct: 11  APPLYERIKGTLREGILSGHYAPASLLPSEAALGEQFNASRITVRQALADLQNEGLIFRR 70

Query: 62  QGLGTFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSP 121
            G GTFV+  K+  ++ A++  A+ +  +GH    + L L  V A   +A AL L  G+ 
Sbjct: 71  HGKGTFVSQPKAFQNVTALQGFAEAMSAQGHAIRNRVLTLRTVPAPTDVAQALQLAPGTA 130

Query: 122 VFHSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQVAPLTEAHHT--IE 179
           V     V      P+ +E  ++  A        D   +     L Q A +   H T  I+
Sbjct: 131 VVELHRVRLLDQFPVSLEVTWLPEALGSVVARADLVTRDVFLVLEQDAGVALGHATLAID 190

Query: 180 AIIASSELQQRLAIPATEPCLQISRRTWSRQGV-VSFAKLVHPGSRFK 226
           A +A       L   A    L++ R T   QG  + F +L   G  F+
Sbjct: 191 AALADHATATALDTGAGAALLRVERLTHDAQGAPIDFERLYFRGDAFQ 238