Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 277 a.a., transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score = 82.4 bits (202), Expect = 8e-21
 Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 3/226 (1%)

Query: 4   PKFAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQG 63
           P +A+IK  +   I  G +  ++++PSE++L  +F  SR+T R+AL +L   G+L +  G
Sbjct: 22  PLYAQIKDVLRERILDGSYAPHSQMPSEHELCRMFDVSRITVRQALGDLHKEGLLFKVHG 81

Query: 64  LGTFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPVF 123
            GTFV+  K+  ++ +++  A+ +   GH    Q  +   V A   IA  L +  G+PV 
Sbjct: 82  KGTFVSKPKAYQNVASLQGFAEAMSSMGHEIVNQLRSCRTVEAGRHIAARLNIAEGAPVT 141

Query: 124 HSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQ--VAPLTEAHHTIEAI 181
               V      P+ +E  +V           D + +     L      PL  A  +I+AI
Sbjct: 142 EIHRVRLLNREPVSLELTWVPLTLGKRLANADLTTRDIFLILENDCGVPLGHADVSIDAI 201

Query: 182 IASSELQQRLAIPATEPCLQISRRTWSRQG-VVSFAKLVHPGSRFK 226
           +A  ++   L +    P L+I R T    G  V F  L   G  F+
Sbjct: 202 LAHDDIVDALRVEEGSPVLRIERLTHDASGRPVDFEYLYFRGDAFQ 247