Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 919 a.a., histidine kinase from Azospirillum brasilense Sp245

 Score =  133 bits (335), Expect = 2e-35
 Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 6/244 (2%)

Query: 105 ALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQ 164
           A+    LA+   R + A E  +LR+++L S+SHDLRTPLA+I+G+ T+L  Y   +  A 
Sbjct: 652 AIERVTLAEDVDRARLAAETERLRSALLTSISHDLRTPLASILGSATSLTAYGAGMDEAS 711

Query: 165 TEELIDSAAAESHRLHQYIENLLQANKLQHGALKFSLDEANIREVLQRTIARFQ--TEQP 222
             +L  +   E+ RL+++I NLL   +L+ GA++      ++ E +   + R        
Sbjct: 712 RRDLAATIQEEAERLNRFIANLLDMTRLESGAIRPRTGPVDLAETVGSALGRAGRILAGH 771

Query: 223 RIQIQSEPELPSLMICSSLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQDQG 282
           R+ +    +LP L     L EQ +FN+LDNA  Y+P    + V   R    +RI+++D+G
Sbjct: 772 RVDVDLAADLPMLEADDVLFEQVLFNLLDNAAKYAPTGSLIQVGASREGDRVRIEVRDEG 831

Query: 283 KGIAPSQTGAIFELFYR--QHPTTDGGAGLGLPVAKGIITAHNGTISA--EKVAHGSLIR 338
            GI  +    IF+ FYR         G GLGL + +G + A  GTI+A   K   G++  
Sbjct: 832 DGIPAADVERIFDKFYRVQAQDRQRAGTGLGLAICRGFVEAMGGTIAAGNRKDRSGAVFT 891

Query: 339 IALP 342
           + +P
Sbjct: 892 LTMP 895



 Score = 38.1 bits (87), Expect = 9e-07
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 20  FTAMLLVVVLITSYFIDVFSGSAIAVLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFL 79
           + A+ L +  +    +DV +     V L+   AV+  A+      + +  V   ++FN+ 
Sbjct: 412 YVALALGIGEVLQQVLDVSN-----VALVFLTAVLTSAVTGGLGPSLYACVASILAFNYF 466

Query: 80  FTAPRYSLQMLNVEDIVNLTVFLLAALTSSKLAKHYRRQ 118
           F  P Y+  + + E+IV L  F + A+ +S L    R Q
Sbjct: 467 FLNPLYTFSIADPENIVALFFFAVVAVIASNLTARVRAQ 505