Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 377 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  105 bits (262), Expect = 2e-27
 Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 15/266 (5%)

Query: 96  VNLTVFLLAALTSSKLAKHYRR----QQDALEQAQLR-------NSILLSVSHDLRTPLA 144
           V++ V LL   T  ++ +  R+    Q+  LE+ + R       +  +   SH+L+TPL 
Sbjct: 105 VDINVLLLKIKTFYRIYEQNRKLNEVQEKLLEEIEFRKQAEHKKDEFISIASHELKTPLT 164

Query: 145 TIIGTLTTLKEYQPKLSPAQTEELIDSAAAESHRLHQYIENLLQANKLQHGALKFSLDEA 204
           ++ G +  L+    +      +  ++ A+ +  +L++ I +LL  +K++ G +KF++   
Sbjct: 165 SVKGYIQLLQRSLNRDDKTMAQNHLEKASIQLEKLNELIVDLLDISKIESGKMKFNMKSF 224

Query: 205 NIREVLQRTIARFQTEQPRIQIQSEPELPSLMICSSL-IEQAIFNVLDNALHYSPATQPV 263
            +  ++   I   Q   P  +I    +   ++    + +EQ + N + NA+ Y+P T  V
Sbjct: 225 CVDNMVNNAIEMLQQSNPDFKISKLGKTDEMVFGDEMRLEQVVINFITNAIKYAPGTNQV 284

Query: 264 TVSLYRHQHMLRIDIQDQGKGIAPSQTGAIFELFYRQHPTTD--GGAGLGLPVAKGIITA 321
            V+++     L + ++D G GI+  Q   IF+ FYR    ++   G G+GL +   II  
Sbjct: 285 NVTIHIKDEKLYLAVKDFGIGISKEQQHKIFDKFYRVEENSNRFNGLGIGLYICSEIINR 344

Query: 322 HNGTISAEKVA-HGSLIRIALPITKE 346
           H GTI    V   GS     +P T+E
Sbjct: 345 HGGTIGVNSVPDEGSEFYFIIPTTEE 370