Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 898 a.a., osmosensitive K+ channel histidine kinase from Dechlorosoma suillum PS

 Score =  107 bits (266), Expect = 2e-27
 Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 5/216 (2%)

Query: 122 LEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQTEELIDSAAAESHRLHQ 181
           +E  +LRN +L ++SHDLRTPL  ++G   +L      L PAQ E L  +   E+ R   
Sbjct: 663 MESERLRNGLLAALSHDLRTPLTALVGLADSLS-LGGALPPAQAE-LAQAIRGEAMRTSA 720

Query: 182 YIENLLQANKLQHGALKFSLDEANIREVLQRTI-ARFQT-EQPRIQIQSEPELPSLMICS 239
            + NLL   +LQ G +    +   + EV+   + AR     Q R+++    +LP L   +
Sbjct: 721 LVHNLLDMARLQSGQVTLKKEWQPLEEVVGAALQARASVLAQHRVRVDLPADLPLLEFDA 780

Query: 240 SLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQDQGKGIAPSQTGAIFELFYR 299
            L+E+   N+++NA  Y+P    + +   R    + + + D G G+ P +   +FE F R
Sbjct: 781 VLMERVFCNLIENAAKYTPPGSLIEIGARREAERVLVSVSDNGPGLPPGKEAGLFEKFTR 840

Query: 300 -QHPTTDGGAGLGLPVAKGIITAHNGTISAEKVAHG 334
            Q  +   G GLGL + + I+ AH G + AE  + G
Sbjct: 841 GQDESAIPGVGLGLAIVRAIVDAHKGKVWAENRSDG 876



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 26/99 (26%), Positives = 51/99 (51%)

Query: 45  VLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFLFTAPRYSLQMLNVEDIVNLTVFLLA 104
           ++++  LAV+  A++   N A   A     +F+F F +PR S  + +V+ ++  +V L  
Sbjct: 433 IVMLFLLAVLFAAVKLGRNPAILAAFLSVAAFDFFFVSPRLSFAVSDVQYLLTFSVMLAV 492

Query: 105 ALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPL 143
           AL +++L    R Q D  +  + R+  L  ++ +L   L
Sbjct: 493 ALITAQLTAGLRFQVDVAQSRERRSDALYEMARELSAAL 531