Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 977 a.a., histidine kinase from Cupriavidus basilensis FW507-4G11

 Score =  111 bits (277), Expect = 9e-29
 Identities = 70/228 (30%), Positives = 122/228 (53%), Gaps = 7/228 (3%)

Query: 121 ALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQTEELIDSAAAESHRLH 180
           ++E  +LR+S+L +VSHDLRTPL ++IG   T++  +P L PA   E +D+   ++ R+ 
Sbjct: 711 SMESERLRSSLLAAVSHDLRTPLTSLIGMAETMQRTEPPL-PASLSETVDAMREQALRMR 769

Query: 181 QYIENLLQANKLQHGALKFSLDEANIREVLQRTIA--RFQTEQPRIQIQSEPELPSLMIC 238
             + NLL   +LQ   ++   +  ++ E++   +A  R    + R+ +     LP +   
Sbjct: 770 TMVVNLLDMARLQSRDVRMQKEWQSLEELVGAALAGMRDALSRHRVSVADLSALPLVECD 829

Query: 239 SSLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQDQGKGIAPSQTGAIFELFY 298
           + L+E+ + N+L+NA  Y+P    + +S    +  +R+ + D G G+   Q  +IF+ F 
Sbjct: 830 AVLMERVLCNLLENAAKYTPPGTGIRISGEVAETEVRLAVADDGPGVPRGQELSIFQKFT 889

Query: 299 R-QHPTTDGGAGLGLPVAKGIITAHNGTISAEKV---AHGSLIRIALP 342
           R +  +   G GLGL V + I+ AH G I  E V     G+   +ALP
Sbjct: 890 RGERESATAGVGLGLAVCEAIVQAHGGRIWVESVNADHTGARFVVALP 937



 Score = 40.0 bits (92), Expect = 3e-07
 Identities = 25/101 (24%), Positives = 43/101 (42%)

Query: 43  IAVLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFLFTAPRYSLQMLNVEDIVNLTVFL 102
           + + ++   AVV VAL+     A   +V    +F+F F  PR S  + +V+ +V   V L
Sbjct: 477 VNIAMLFLAAVVGVALRHGRGPAALASVLSVAAFDFFFVPPRMSFAVSDVQYLVTFAVLL 536

Query: 103 LAALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPL 143
              L   +L    R Q     + +     L  ++ +L   L
Sbjct: 537 TVGLVIGQLTAGLREQAQVSVERETDARTLYELARELSAAL 577