Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 938 a.a., sensor histidine kinase KdpD from Ralstonia sp. UNC404CL21Col

 Score =  116 bits (290), Expect = 3e-30
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 8/228 (3%)

Query: 122 LEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQTEELIDSAAAESHRLHQ 181
           +E  +LRNS+L +VSHDLRTPL  ++G   TL   QP L PA   E   +   ++ R+  
Sbjct: 698 IESERLRNSLLAAVSHDLRTPLTGLVGMAETLLRAQPPL-PALQAEAAAAIGQQAQRMRT 756

Query: 182 YIENLLQANKLQHGALKFSLDEANIREVLQRTIARFQTEQPRIQIQSEPELPSLMICSSL 241
            + NLL   +LQ+  +K  L+  +I E++   +        R+ +     LP +     L
Sbjct: 757 MVTNLLDMARLQNQDVKLRLEWQSIEELVGAALQANPLPDHRVVVDHLSALPLIRCDGPL 816

Query: 242 IEQAIFNVLDNALHYSPATQPVTVS--LYR---HQHMLRIDIQDQGKGIAPSQTGAIFEL 296
           +E+ + N+L+NA  ++PA   V VS  L R   H + LR+ ++D G G+       IFE 
Sbjct: 817 MERVLSNLLENAGKFAPAGTEVRVSGELVRDEAHGNELRLRVRDHGPGVPAGSVRTIFEK 876

Query: 297 FYR-QHPTTDGGAGLGLPVAKGIITAHNGTISAEKVAH-GSLIRIALP 342
           F R +  +   G GLGL V + I++AH+G I  E  A  G+   +ALP
Sbjct: 877 FTRGEKESATTGVGLGLAVCEAIVSAHHGRIWVEAPADGGACFVVALP 924



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 2/118 (1%)

Query: 26  VVVLITSYFIDVFSGSAIAVLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFLFTAPRY 85
           V   ++S    VF  + I +L +   AVV VA++     A   +V     F+F F  PR+
Sbjct: 442 VATALSSLVRPVFDLANIVMLFLA--AVVAVAMRHGRGPAALASVLSVALFDFFFVPPRF 499

Query: 86  SLQMLNVEDIVNLTVFLLAALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPL 143
           S  + +V+ ++   V L   +   +L    R Q +   Q +     L   + +L   L
Sbjct: 500 SFAVSDVQYLLTFGVMLAVGMLVGQLTAGLREQAEVAVQREASAHALYEAARELSAAL 557