Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 944 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score =  107 bits (266), Expect = 2e-27
 Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 12/215 (5%)

Query: 122 LEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQTEELIDSAAAESHRLHQ 181
           +E  +LRNS+L ++SHDLRTPL TI+G  + L +  P   P    EL+++   E+ R+  
Sbjct: 675 MESERLRNSLLSAISHDLRTPLTTIVGFSSMLAQ-APDAQP--NGELVEAIHEEALRMTG 731

Query: 182 YIENLLQANKLQHGALKFSLDEANIREVL---QRTIARFQTEQPRIQIQSEPELPSLMIC 238
            + NLL   +LQ G+L+ +     + E +    R   R  T  P ++++   +LP L + 
Sbjct: 732 IVTNLLDMARLQAGSLQLNQQWTLLEETVGAALRACKRVLTNHP-VRVKLPADLPLLHLD 790

Query: 239 SSLIEQAIFNVLDNALHYSPATQPVTVSLYR----HQHMLRIDIQDQGKGIAPSQTGAIF 294
           + L+E+   N+ +NA  Y+    P+T+   R     +  +R+ + D G G+       +F
Sbjct: 791 AVLMERLFSNLFENAAKYTAPATPLTIGAQRLDADGKSFVRVTVDDSGPGLPAGMEARVF 850

Query: 295 ELFYR-QHPTTDGGAGLGLPVAKGIITAHNGTISA 328
           E F R +  +   G GLGL + + I+ AH GTI A
Sbjct: 851 EKFTRGEKESAKPGIGLGLAICRAIVEAHGGTIGA 885



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 14  RTHPALFTAMLLV---VVLITSYFIDVFSGSAIAVLLILQLAVVVVALQCSANYAYFVAV 70
           R+ P  +   LL+   + L+ S  ID    + + +L +L   V+  A++        ++ 
Sbjct: 407 RSPPRAYGFALLICAAITLLASQLIDHIDLTNLVMLYLL--GVIFAAVKLGRGPGVVLSF 464

Query: 71  FGAVSFNFLFTAPRYSLQMLNVEDIVNLTVFLLAALTSSKLAKHYRRQQDALEQAQLRNS 130
               +F+F F  PR SL + + + ++     LL +L  S L    RR+     + + R  
Sbjct: 465 MSVAAFDFFFVPPRMSLSVSDTQYLLTFFGMLLTSLVISHLTSSLRREASVARRREQRTG 524

Query: 131 ILLSVSHDLRTPLAT 145
            + +++ +L   L T
Sbjct: 525 AMYAMARELAAALTT 539