Pairwise Alignments

Query, 188 a.a., topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., topoisomerase DNA-binding C4 zinc finger domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  344 bits (883), Expect = e-100
 Identities = 151/187 (80%), Positives = 166/187 (88%)

Query: 2   MSKIDEQLFSAHEHALEKEYELCPECGSELSVKHSKHGSFIGCNNYPNCAYTRPLVQHES 61
           MSKID  LFSAHEHALE+E+ELCPECGSELSV+HSKHGSF+GCNNYPNC YTRPLVQHES
Sbjct: 1   MSKIDHSLFSAHEHALEREFELCPECGSELSVRHSKHGSFVGCNNYPNCQYTRPLVQHES 60

Query: 62  IETQVIEGSKCPECGHELAVKSGRFGIFIGCTQYPSCTHIERPDQESDKPQVACPECKTG 121
           IETQVIEGS CPECGHELAVKSGRFGIFIGCTQYP C HIE+PDQ + +  VACP C+TG
Sbjct: 61  IETQVIEGSVCPECGHELAVKSGRFGIFIGCTQYPECHHIEKPDQAAPEEAVACPVCQTG 120

Query: 122 KLEHRTSRFGKGFYACSAYPKCKFIVNYPPVGETCPSCGFGILVERKGAAGMRLECPQKS 181
            ++HRT+R+GKGFYACS YPKCKF+VNYPPV E CP CGFG+LV+RKGA G RLECP K 
Sbjct: 121 VMDHRTNRYGKGFYACSCYPKCKFLVNYPPVAEACPDCGFGLLVQRKGAGGTRLECPNKP 180

Query: 182 CKYKRAL 188
           CKYKR L
Sbjct: 181 CKYKRPL 187