Pairwise Alignments

Query, 188 a.a., topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  338 bits (868), Expect = 3e-98
 Identities = 154/187 (82%), Positives = 163/187 (87%)

Query: 2   MSKIDEQLFSAHEHALEKEYELCPECGSELSVKHSKHGSFIGCNNYPNCAYTRPLVQHES 61
           MSKID+QLFS+HEHALEKEYELCP+CG ELSVK+SKHG FIGCNNYP C YTRPLV HES
Sbjct: 1   MSKIDDQLFSSHEHALEKEYELCPKCGCELSVKNSKHGGFIGCNNYPCCDYTRPLVHHES 60

Query: 62  IETQVIEGSKCPECGHELAVKSGRFGIFIGCTQYPSCTHIERPDQESDKPQVACPECKTG 121
           IETQVIEGS+CPECG ELAVKSGRFGIFIGCT+YP C HIE+ DQE     V CP C  G
Sbjct: 61  IETQVIEGSECPECGAELAVKSGRFGIFIGCTRYPDCKHIEKQDQEDPAEAVTCPSCHKG 120

Query: 122 KLEHRTSRFGKGFYACSAYPKCKFIVNYPPVGETCPSCGFGILVERKGAAGMRLECPQKS 181
            +EHRTSRFGK FYACSAYPKCKF+VNYPPV E CP CGFGILVERKGAAGMRLECPQKS
Sbjct: 121 VMEHRTSRFGKSFYACSAYPKCKFLVNYPPVQEACPDCGFGILVERKGAAGMRLECPQKS 180

Query: 182 CKYKRAL 188
           CKYKR L
Sbjct: 181 CKYKRPL 187