Pairwise Alignments

Query, 188 a.a., topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 182 a.a., topoisomerase DNA-binding C4 zinc finger domain-containing protein from Pantoea sp. MT58

 Score =  175 bits (443), Expect = 5e-49
 Identities = 77/165 (46%), Positives = 108/165 (65%), Gaps = 2/165 (1%)

Query: 19  KEYELCPECGSELSVKHSKHGSFIGCNNYPNCAYTRPLV-QHESIETQVIEGSKCPECGH 77
           ++ + CP CG+EL ++  KHG F+GC NYP C Y RPL  Q +    +V+EG  CPECG 
Sbjct: 10  RKQDPCPACGAELVIRSGKHGPFLGCANYPACDYIRPLKGQADGHVVKVLEGHACPECGA 69

Query: 78  ELAVKSGRFGIFIGCTQYPSCTHIERPDQESDKPQVACPECKTGKLEHRTSRFGKGFYAC 137
           +  ++ GRFG+FIGC+ YP C + E  D+  D+  +ACP+C  G+L  R SR+GK F++C
Sbjct: 70  DKVLRQGRFGMFIGCSCYPECGYTETIDKP-DETSLACPQCHEGRLVQRRSRYGKTFHSC 128

Query: 138 SAYPKCKFIVNYPPVGETCPSCGFGILVERKGAAGMRLECPQKSC 182
             YP C+F+VN  PV   CP C + +LVE+K A G++  C  KSC
Sbjct: 129 DRYPACQFVVNLTPVAGICPYCEYPLLVEKKTAQGIKRFCASKSC 173