Pairwise Alignments

Query, 188 a.a., topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  394 bits (1011), Expect = e-115
 Identities = 180/187 (96%), Positives = 183/187 (97%)

Query: 2   MSKIDEQLFSAHEHALEKEYELCPECGSELSVKHSKHGSFIGCNNYPNCAYTRPLVQHES 61
           MSKIDEQLFSAHEHALEKE+ELCPECGSELSVKHSKHGSFIGCNNYP C YTRPLVQHES
Sbjct: 1   MSKIDEQLFSAHEHALEKEFELCPECGSELSVKHSKHGSFIGCNNYPTCQYTRPLVQHES 60

Query: 62  IETQVIEGSKCPECGHELAVKSGRFGIFIGCTQYPSCTHIERPDQESDKPQVACPECKTG 121
           IETQVIEGSKCPECGHELAVKSGRFGIFIGCTQYPSCTHIERPDQE+DKP+VACPECKTG
Sbjct: 61  IETQVIEGSKCPECGHELAVKSGRFGIFIGCTQYPSCTHIERPDQENDKPEVACPECKTG 120

Query: 122 KLEHRTSRFGKGFYACSAYPKCKFIVNYPPVGETCPSCGFGILVERKGAAGMRLECPQKS 181
           KLEHRTSRFGK FYACSAYPKCKFIVNYPPV ETCPSCGFGILVERKGAAGMRLECPQKS
Sbjct: 121 KLEHRTSRFGKSFYACSAYPKCKFIVNYPPVAETCPSCGFGILVERKGAAGMRLECPQKS 180

Query: 182 CKYKRAL 188
           CKYKRAL
Sbjct: 181 CKYKRAL 187