Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 170 a.a., Peptide deformylase (EC 3.5.1.88) from Xanthomonas campestris pv. campestris strain 8004

 Score =  194 bits (492), Expect = 8e-55
 Identities = 95/170 (55%), Positives = 123/170 (72%), Gaps = 3/170 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITE---FNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQ 57
           MALL +L FPD RLRT+A P+      +   QT +DDMF+TMY+  GIGLAA+QVD HK+
Sbjct: 1   MALLPILEFPDPRLRTKAVPVDAAEVVSPAFQTLLDDMFQTMYEAPGIGLAASQVDVHKR 60

Query: 58  LIVMDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
            +V+D+ +E + P+VFINPEI+   G+   +EGCLSVPGI+A V RA+ +TV+ LDR G 
Sbjct: 61  FMVIDVSEEKDAPQVFINPEIVTRQGEQVYQEGCLSVPGIFADVSRADAITVRYLDRQGQ 120

Query: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDA 167
              +  D L A+CIQHEMDHL GKLFVDYLSPLKR+ +++KL K  K  A
Sbjct: 121 PQELSTDGLLAVCIQHEMDHLDGKLFVDYLSPLKREMVRKKLAKLRKHVA 170