Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 178 a.a., peptide deformylase from Sinorhizobium meliloti 1021

 Score =  151 bits (382), Expect = 5e-42
 Identities = 78/167 (46%), Positives = 111/167 (66%), Gaps = 3/167 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           M +  ++  PD  LR  +TP+   +A+++   DDM ETMY   GIGLAA Q+   K+L+V
Sbjct: 5   MTIKPLIILPDPVLRQVSTPVETIDADIRRLADDMLETMYDAPGIGLAAIQIGVPKRLLV 64

Query: 61  MDLQDEVE--RPKVFINPEIIASSGD-FCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           +D+  E E  +P VFINP+++ SS +    EEGCLS+P  YA+V+R   +TV+ +DR G 
Sbjct: 65  LDVTKEGEEKQPLVFINPKVVRSSEERSVYEEGCLSIPDYYAEVERPAAITVEYVDREGK 124

Query: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAK 164
           E  VEA+ L A C+QHE+DHL G LF+DY+S LKR  + ++  KAAK
Sbjct: 125 EQAVEAEGLLATCLQHEIDHLNGVLFIDYISKLKRDMVIRRFTKAAK 171