Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 172 a.a., Peptide deformylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  137 bits (344), Expect = 1e-37
 Identities = 82/171 (47%), Positives = 104/171 (60%), Gaps = 3/171 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           MALL +L  PD RL  +A P+   +  ++  +DDM ETMY   GIGLAA QV   K++IV
Sbjct: 1   MALLPILTAPDPRLTKKALPVETVDVSIRKLMDDMLETMYLAPGIGLAAPQVGVLKRVIV 60

Query: 61  MD--LQDEVERPKVFINPEIIASSGDFCN-EEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           +D   +DE  RP    NPEII SS D    EEGCLSVP  Y  V R + V V+ LD    
Sbjct: 61  LDPAREDEAPRPMRLANPEIIWSSEDTKPYEEGCLSVPEQYDTVVRPDRVRVRYLDPDNE 120

Query: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168
              ++AD L A+ +QHE+DHL G LFVDYLS LKR  + +KL K  +  A+
Sbjct: 121 IREIDADGLLAVILQHEIDHLDGILFVDYLSSLKRNMMLRKLRKMKRTGAE 171