Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 175 a.a., peptide deformylase from Rhodopseudomonas palustris CGA009

 Score =  156 bits (395), Expect = 2e-43
 Identities = 84/173 (48%), Positives = 113/173 (65%), Gaps = 5/173 (2%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           MAL +++  PD+RLR  + P+TE   E++   DDMFE+MY+  GIGLAA Q+    +LI 
Sbjct: 1   MALREIIILPDKRLREISKPVTEVTTEIRKLADDMFESMYEAPGIGLAAIQIAEPVRLIT 60

Query: 61  MDLQ----DEVERPKVFINPEIIASSGDF-CNEEGCLSVPGIYAKVDRAEFVTVKALDRH 115
           MD+     D    P+ FINPEI+ +S +    EEGCLS+P  YA+V+R + V ++  D  
Sbjct: 61  MDIVRKEGDGKSDPRAFINPEIVGASSEMNVYEEGCLSIPEYYAEVERPKTVRIRYTDLD 120

Query: 116 GNEFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168
           GN    +AD LFA CIQHE+DHL G LFVD+LS LKR  + +K EKAAK+  K
Sbjct: 121 GNVKEEDADGLFATCIQHEIDHLNGVLFVDHLSKLKRAMVIRKFEKAAKRGIK 173