Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 172 a.a., peptide deformylase Def from Phaeobacter inhibens DSM 17395

 Score =  144 bits (364), Expect = 6e-40
 Identities = 77/164 (46%), Positives = 104/164 (63%), Gaps = 4/164 (2%)

Query: 6   VLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIVMDL-- 63
           +L  PD RL+     + + +  L+T  DDM ETMY   GIGLAA Q+    +LIV+D   
Sbjct: 5   ILIHPDPRLKKVCAAVPDMSDALRTLADDMLETMYAAPGIGLAAPQIGVLDRLIVLDCVK 64

Query: 64  -QDEVERPKVFINPEIIASSGDF-CNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEFTV 121
            +D   RP V  NPE++ASS +    EEGCLS+P  YA+V R + V V+ +DR GN    
Sbjct: 65  EEDGPARPLVMFNPEVVASSDETNVYEEGCLSIPDQYAEVTRPKVVEVEWMDRDGNAQRE 124

Query: 122 EADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQ 165
             D L+A C+QHE+DHL GKLF+DYL PLKRQ I +K++K  ++
Sbjct: 125 TFDGLWATCVQHEIDHLNGKLFIDYLKPLKRQMITRKMQKLKRE 168