Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 186 a.a., peptide deformylase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  110 bits (274), Expect = 2e-29
 Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 5/170 (2%)

Query: 4   LKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIVMDL 63
           L ++ + D  L+   T I +   EL+  I DMF+TMY   G+GLAA QV    +L ++D 
Sbjct: 3   LPIVAYGDPVLKKVGTDIDKDYPELKQLISDMFDTMYYANGVGLAAPQVGLPIRLFIVDT 62

Query: 64  -QDEVERP---KVFINPEIIASSGDFCN-EEGCLSVPGIYAKVDRAEFVTVKALDRHGNE 118
            +DE  +P   KVFIN EI+  +G+  +  EGCLS+P I   + R   V +   D +  E
Sbjct: 63  GEDEDGKPGYKKVFINAEILEETGEAWSFNEGCLSIPDIRENIMRKPNVKITYFDENWVE 122

Query: 119 FTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168
            T + D + A  IQHE DH++GKLF D +S L++  +K KL+  +K + K
Sbjct: 123 HTEDVDGMAARVIQHEYDHIEGKLFTDKVSVLRKTMLKSKLDAISKGNIK 172