Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 170 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  299 bits (765), Expect = 2e-86
 Identities = 148/168 (88%), Positives = 158/168 (94%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           M+LLKVLRFPDERLRT A PITEFNAELQTQID+MFETMY+EKGIGLAATQVDYH QLIV
Sbjct: 1   MSLLKVLRFPDERLRTIAKPITEFNAELQTQIDNMFETMYEEKGIGLAATQVDYHHQLIV 60

Query: 61  MDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEFT 120
           MDLQD+VERPKVFIN EII  SGDFCNEEGCLSVPGIYAKVDRAEFVT+KALDR GNEFT
Sbjct: 61  MDLQDDVERPKVFINLEIIEKSGDFCNEEGCLSVPGIYAKVDRAEFVTIKALDRDGNEFT 120

Query: 121 VEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168
           +EAD LFAIC+QHE+DHL GKLFVDYLSPLKRQRIKQKLEKAA+ +AK
Sbjct: 121 LEADGLFAICLQHELDHLNGKLFVDYLSPLKRQRIKQKLEKAARLEAK 168