Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 163 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  163 bits (412), Expect = 2e-45
 Identities = 83/162 (51%), Positives = 114/162 (70%), Gaps = 2/162 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQ-EKGIGLAATQVDYHKQLI 59
           M +L +L  PDERL+ +A P+ +  A +Q  IDD+ ETMY  + GIGLAATQV     ++
Sbjct: 1   MPVLDILTIPDERLKRKAKPVEDI-AAVQGFIDDLIETMYHTDDGIGLAATQVGSEHAIL 59

Query: 60  VMDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEF 119
           V+DL ++ ++P V INPE +  SG+   EEGCLS+PG  AKV R E V VKAL+R G  F
Sbjct: 60  VIDLSEDRDQPMVVINPEFVERSGEIVGEEGCLSIPGYRAKVTRFEKVKVKALNREGEAF 119

Query: 120 TVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEK 161
            +E+DD  AI +QHEMDHL GK+F+++LSPLK+Q   +K++K
Sbjct: 120 EIESDDFLAIVLQHEMDHLDGKVFIEHLSPLKQQIALKKVKK 161