Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., peptide deformylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  134 bits (336), Expect = 1e-36
 Identities = 74/171 (43%), Positives = 99/171 (57%), Gaps = 3/171 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           M +  +L  PD RL+    P+ E   E++   DDM  TMY   GIGLA  QV    ++I 
Sbjct: 14  MTIRPILIHPDPRLKKTVDPVAEITDEIRQLADDMLATMYDAPGIGLAGPQVAAMTRIIT 73

Query: 61  MDL--QDEVERPKVFINPEIIASSGDFCN-EEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           MD   +D    P V INPEI+ SS +    EEGCLS+P +YA V+R   V V+     G 
Sbjct: 74  MDCAPKDGEPDPMVLINPEIVWSSEEMNTYEEGCLSIPEMYADVERPAEVEVRWTTLEGG 133

Query: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168
           + +     L A C+QHE+DHL GKLF+DYL PLKRQ I +K+ K  ++ A+
Sbjct: 134 DASARWGGLHATCVQHEIDHLNGKLFIDYLKPLKRQMITRKMVKLKRERAR 184