Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 379 a.a., Methionyl-tRNA formyltransferase (EC 2.1.2.9) from Xanthomonas campestris pv. campestris strain 8004

 Score =  281 bits (720), Expect = 1e-80
 Identities = 152/302 (50%), Positives = 193/302 (63%), Gaps = 2/302 (0%)

Query: 3   PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPV 62
           P+ I+FAGTPDFA   L+A     H V+AVYTQPDRPAGRG+ LT SPVK  A++  IPV
Sbjct: 72  PMRIVFAGTPDFAVASLRAAAQ-RHEVVAVYTQPDRPAGRGRGLTPSPVKLDAIARGIPV 130

Query: 63  YQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAP 122
           +QP +LR   A   L +L  D+MVVVAYGLILPK VL  P  GC NVH S+LPRWRGAAP
Sbjct: 131 FQPQTLRSPEALATLRALQPDLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 190

Query: 123 IQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQA 182
           IQRA+ AGD ETGV +MQM+ GLDTG +LL   + I + +T   L+++LA  G   L   
Sbjct: 191 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRVEIGEQETGGQLHDRLAALGAQVLSDG 250

Query: 183 LEGLANGTL-AAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFEHQ 241
           L  L  G    A+ Q      YA KL K +ARLDW + A +L + VRAFNPWPV+     
Sbjct: 251 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAEELARRVRAFNPWPVAEAILA 310

Query: 242 GNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADILN 301
           G  +++        +   APGT++ ASK+GID++ G G L +  +Q  G K ++ AD LN
Sbjct: 311 GERVRLHGAVALDLAHQQAPGTLLAASKQGIDIACGQGALRVRVLQREGGKAITAADYLN 370

Query: 302 AR 303
           AR
Sbjct: 371 AR 372