Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., methionyl-tRNA formyltransferase from Sinorhizobium meliloti 1021

 Score =  215 bits (547), Expect = 1e-60
 Identities = 119/303 (39%), Positives = 178/303 (58%), Gaps = 10/303 (3%)

Query: 3   PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGR-GKKLTASPVKELALSHSIP 61
           PL +IF GTP+F+   L AL  + H + AVYTQP RP GR G  L  SPV + A    IP
Sbjct: 2   PLRMIFMGTPEFSVPTLLALAGAGHEIAAVYTQPPRPGGRRGLDLQKSPVHQAAERLGIP 61

Query: 62  VYQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
           V  P + +    +Q      AD+ VVVAYGL+LP+ +L   R GC N H S+LPRWRGAA
Sbjct: 62  VLTPANFKDAADRQTFRDFGADVAVVVAYGLLLPEEILSGTRYGCYNGHASLLPRWRGAA 121

Query: 122 PIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQ 181
           PIQRA+ AGD+ETG+ +M+MD GLDTG + L   +PI+    +  L+++L   G   + +
Sbjct: 122 PIQRAIMAGDRETGMMVMKMDKGLDTGPVALAQSVPIDGMMRAGELHDRLMQVGAVLMTE 181

Query: 182 ALEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFE-- 239
           A+  L +G L    Q +    YA K+SKEE R+D+++ A ++   +R  +P+P ++FE  
Sbjct: 182 AMARLESGELPLAPQAQEGVAYAAKISKEETRIDFSRPAAEVHNHIRGLSPFPGAWFELD 241

Query: 240 --HQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVA 297
              +   +KV  +++S       PG +++ +   + ++ G+G + L  +Q  G K L+ A
Sbjct: 242 IAGRRERVKVLASEMS--EGEGDPGEVLDHT---LGIACGEGAVRLTRLQRAGGKALAAA 296

Query: 298 DIL 300
           D L
Sbjct: 297 DFL 299