Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 310 a.a., methionyl-tRNA formyltransferase from Rhodopseudomonas palustris CGA009

 Score =  224 bits (571), Expect = 2e-63
 Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 5/300 (1%)

Query: 3   PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPV 62
           PL ++F GTP+FA   L AL    H++ AVYT+  +PAGRG KL  + V   A     PV
Sbjct: 2   PLRLVFMGTPEFAVPTLLALAAHGHDIAAVYTREPKPAGRGMKLQETAVALAAHRLQAPV 61

Query: 63  YQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAP 122
             P +LR + A     +  AD  VVVAYG+ILP+ +LD P LGC N+HGS+LPRWRGAAP
Sbjct: 62  LTPKTLRTDEALANFRAHEADAAVVVAYGMILPQAILDAPELGCYNLHGSLLPRWRGAAP 121

Query: 123 IQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQA 182
           + RA+ AGD ETGV +M+MD GLDTGD+ +   + I D  T   ++++LA  G D +++A
Sbjct: 122 LNRAIMAGDAETGVMVMKMDAGLDTGDVAMAERIAITDAMTVTDVHDQLARLGADLMVRA 181

Query: 183 LEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFE--H 240
           +  L  G L   KQ E    YA K+ K EA++D+ K    + + +   +P+P ++ E   
Sbjct: 182 MAALERGGLQLTKQSEDGVTYAAKIDKAEAKIDFAKPTRAVLRHIHGLSPFPGAWCELPI 241

Query: 241 QGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADIL 300
           +G  +++   + +       PG +I+     + ++ GDG + +  +Q  GK+P++  + L
Sbjct: 242 EGQPVRIKVLRCAIADGRGEPGEVID---DHLTIACGDGAIRVSQLQRAGKQPMTAEEFL 298