Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., methionyl-tRNA formyltransferase Fmt from Phaeobacter inhibens DSM 17395

 Score =  244 bits (623), Expect = 2e-69
 Identities = 127/288 (44%), Positives = 184/288 (63%), Gaps = 7/288 (2%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           + I+F GTPDF+   L AL+ + H++ AVY QP RPAGRGKK   +PV   A +    V 
Sbjct: 1   MRIVFMGTPDFSVPVLDALVEAGHDIAAVYCQPPRPAGRGKKDRPTPVHARAEALGFEVR 60

Query: 64  QPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPI 123
            P SL+    Q E A+LNAD+ VVVAYGLILP+ VLD PR GC+N+H S+LPRWRGAAPI
Sbjct: 61  HPVSLKDAQQQAEFAALNADVAVVVAYGLILPQAVLDAPRQGCLNIHASLLPRWRGAAPI 120

Query: 124 QRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQAL 183
            RA+ AGD +TGV IMQM+ GLDTG +L++    I  ++T+A L+++L+  G + ++QAL
Sbjct: 121 HRAIMAGDAQTGVCIMQMEAGLDTGPVLMREATDIGAEETTAQLHDRLSEMGAELIVQAL 180

Query: 184 EGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFEHQGN 243
             L   T   +  D     YA K+ K EAR+DWT+ A ++ Q++R  +P+P ++ E  G 
Sbjct: 181 TQLTKLTPVVQPDDG--VTYAHKIDKSEARVDWTRPAVEVDQQIRGLSPFPGAWCEIDGQ 238

Query: 244 TIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGK 291
            +K+  ++V       A G +++ S   + ++ G+G + LL +Q  GK
Sbjct: 239 RVKLLASRV--VDGAGAAGRVLDDS---LRIACGEGAVELLKLQRAGK 281