Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., methionyl-tRNA formyltransferase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  211 bits (536), Expect = 2e-59
 Identities = 108/298 (36%), Positives = 175/298 (58%), Gaps = 2/298 (0%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           + I+F GTPDFA   L A++ ++ +V+AV T PD+PAGRG+KL  S VK+ A+   IPV 
Sbjct: 1   MKIVFMGTPDFAVASLDAIVQANFDVVAVVTAPDKPAGRGQKLNESAVKKYAVEKGIPVL 60

Query: 64  QPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPI 123
           QP  L+     +EL S  AD+ VVVA+ + LP++V + P  G IN+HGS+LP++RGAAPI
Sbjct: 61  QPEKLKNPEFIEELRSYQADLQVVVAFRM-LPEIVWNMPAKGTINLHGSLLPQYRGAAPI 119

Query: 124 QRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQAL 183
             A+  G+KE+GVT   +   +DTGD++L   +PI DD+T+  L++KL + G + L++ L
Sbjct: 120 NHAIINGEKESGVTTFFLKQEIDTGDIILSDSVPIADDETAGDLHDKLMVVGANLLVKTL 179

Query: 184 EGLANGTLAAEKQDET-LANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFEHQG 242
             +    +  + Q +     +A K+ KE+ ++DW   A  +   +R  +P+P ++     
Sbjct: 180 HAVEANNITEQPQPQNDDLKHAPKIFKEDCKIDWNNPAQTIHNLIRGLSPYPTAFTILND 239

Query: 243 NTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADIL 300
             +KV++ ++         G  +   K  +  +  DG + LL +Q  GKK + + D L
Sbjct: 240 KNLKVFKAEIEDKEPGIVAGGFLTDGKTYLKFAAKDGFIKLLDIQYEGKKRMLIEDFL 297