Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., methionyl-tRNA formyltransferase from Herbaspirillum seropedicae SmR1

 Score =  299 bits (765), Expect = 7e-86
 Identities = 160/306 (52%), Positives = 209/306 (68%), Gaps = 9/306 (2%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           + IIFAGTP+FAA  L+AL  + H +  V TQPDRPAGRG +L ASPVK+ AL H  PV 
Sbjct: 1   MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCALKHGTPVA 60

Query: 64  QPGSLR-----KEPAQQELASLNA---DIMVVVAYGLILPKVVLDTPRLGCINVHGSILP 115
           QP SLR      E AQ+  A L +   D+M+V AYGLILP+ VLD PR GCIN+HGS+LP
Sbjct: 61  QPVSLRLDGKYPEVAQEAHALLRSTPHDVMIVAAYGLILPRSVLDIPRYGCINIHGSLLP 120

Query: 116 RWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQG 175
           RWRGAAPI RA+ AGD ETG+TIMQM+ GLDTG M+L   LPI D+DT+ SL++KLA  G
Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMEEGLDTGPMMLIESLPISDEDTTGSLHDKLAALG 180

Query: 176 PDALLQALEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPV 235
              +++A+E L  GTL A  Q E  ANYA K++KEEA LD+++SA QL + +RAFNP+P 
Sbjct: 181 AKMIVEAMEKLEQGTLPATPQPEQGANYAAKIAKEEAALDFSQSAEQLARRIRAFNPFPG 240

Query: 236 SYFEHQGNTIKVWQTQVSTTSSTAAPGTIINA-SKKGIDVSTGDGVLTLLSMQLPGKKPL 294
           +        +K+W+ +  T +    PG +++A ++ GI V+ G+G L L  +Q PG K L
Sbjct: 241 ATGRFGDTVVKLWKARAVTVAQQGEPGQVLSADAQGGIVVACGEGALLLTELQKPGGKRL 300

Query: 295 SVADIL 300
             A+ L
Sbjct: 301 PAAEFL 306