Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 327 a.a., methionyl-tRNA formyltransferase from Ralstonia sp. UNC404CL21Col

 Score =  262 bits (669), Expect = 9e-75
 Identities = 143/308 (46%), Positives = 198/308 (64%), Gaps = 11/308 (3%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSI-PV 62
           L + FAGTP+FA   L A+  +   V+AV +QPDRPAGRG +L ASPVK+ A++H   P+
Sbjct: 5   LRVAFAGTPEFAQIALAAIHQAGFPVVAVLSQPDRPAGRGMQLQASPVKQYAVTHGFAPI 64

Query: 63  YQPGSLRKE--------PAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSIL 114
            QP SLR+          A   LA+   D+MVV AYGLILP+ VLD PR GCIN+H S+L
Sbjct: 65  LQPTSLRRTGKYPQEAAEAIDALAAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHASLL 124

Query: 115 PRWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQ 174
           PRWRGAAPI RA+ AGD E+G+T+MQMD GLDTGDM+    +PI   DT+ +L++ LA  
Sbjct: 125 PRWRGAAPIHRAIEAGDAESGITLMQMDAGLDTGDMIAMERVPIGLTDTTGTLHDTLAAL 184

Query: 175 GPDALLQALEGLA-NGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPW 233
           G   +++AL  LA +G L A  Q      YAEK++K+EA LDW++ A  L ++V AFNP+
Sbjct: 185 GGRMVVEALAKLAQDGKLDATPQPAEGITYAEKIAKDEAALDWSRHAAALLRQVHAFNPF 244

Query: 234 PVSYFEHQGNTIKVWQTQ-VSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKK 292
           P +     G  IK W+ + ++   + A PGT++ A+ +G+ ++ G G L +  +Q PG K
Sbjct: 245 PGASAALDGVAIKFWRAEALADRPADAEPGTVLAANAEGVTIACGAGALRVTQLQKPGGK 304

Query: 293 PLSVADIL 300
            L   + L
Sbjct: 305 RLPAREFL 312