Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., methionyl-tRNA formyltransferase from Burkholderia phytofirmans PsJN

 Score =  275 bits (704), Expect = 8e-79
 Identities = 156/308 (50%), Positives = 199/308 (64%), Gaps = 12/308 (3%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           L +IFAGTP+FAA  L A+ ++   V  V TQPDRPAGRG KL ASPVK  A  H + V 
Sbjct: 5   LRVIFAGTPEFAAAALAAIHSAGFQVPLVLTQPDRPAGRGMKLQASPVKRYAQEHGLAVA 64

Query: 64  QPGSLR---KEPAQ-----QELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILP 115
           QP SLR   K PA+      +L +   D+MVV AYGLILP+ VLD P LGCIN+H S+LP
Sbjct: 65  QPPSLRRVGKYPAEAAAAIDQLRATPHDVMVVAAYGLILPQEVLDIPLLGCINIHASLLP 124

Query: 116 RWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQG 175
           RWRGAAPI RA+ AGD ETG+T+MQMDVGLDTG M+ +    I  DDT+A+L+++LA  G
Sbjct: 125 RWRGAAPIHRAIEAGDAETGITLMQMDVGLDTGAMISEARTAITADDTTATLHDRLAQDG 184

Query: 176 PDALLQALEGL-ANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWP 234
              +++AL  L   G LAA  Q      YAEK+ K EA LDW + A  L ++VRAF+P+P
Sbjct: 185 AKLIVEALIELERTGKLAATPQPAEGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDPFP 244

Query: 235 --VSYFEHQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKK 292
             V+  E  G +IK+W      T +  APGTI + S +G+ V+ G+G L L  +Q PG K
Sbjct: 245 GGVATLE-DGTSIKLWAAVARDTQANGAPGTITDVSPEGVVVACGEGALRLTQLQKPGGK 303

Query: 293 PLSVADIL 300
            L V + L
Sbjct: 304 RLPVREFL 311