Pairwise Alignments

Query, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 448 a.a., 16S rRNA m(5)C-967 methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  353 bits (907), Expect = e-102
 Identities = 209/436 (47%), Positives = 262/436 (60%), Gaps = 12/436 (2%)

Query: 1   MNLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTA 60
           MN R  AAKA+  VL    SL+ +LP Q   +   +D+ L  +L +G  R  P++    A
Sbjct: 1   MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVEV-RDRGLTQDLAFGTARWQPRLSALAA 59

Query: 61  ECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR 120
           + L KP K     +  LL+VG YQL+++RIP+HAAI ET     +LK      ++N VLR
Sbjct: 60  KLLQKPFKAADADVEALLLVGLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLR 119

Query: 121 NIQRQLTPLSNESE---TLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLS 177
           N QR    L  E E    +    P WL K LK A+P  W+ I   ++  PPM LR NR  
Sbjct: 120 NAQRDGEALLIELEHDPVVRTAHPRWLQKALKAAWPEQWEAICAANNAHPPMILRVNRRH 179

Query: 178 QSRDEYLAALDKLEIDASA-GLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLL 236
             RD+YL  LD   + ASA   S D I+LA P DV +LP F EG  SVQD AAQ AA LL
Sbjct: 180 HRRDQYLELLDTAGLQASACTFSQDGIVLAEPCDVRSLPGFAEGWISVQDEAAQLAADLL 239

Query: 237 APQANELILDACAAPGGKSCHLLELEPSIK-LIAVDFDAKRLERVQQNLDRLSLKAEVIH 295
                + +LDAC APGGK+CHLLE++P +  ++AVD +AKRL RV++NLDRL L AE+I 
Sbjct: 240 ELAPGQRVLDACCAPGGKTCHLLEVQPQLDGVVAVDLEAKRLVRVRENLDRLGLDAELIA 299

Query: 296 GDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCW 355
            DA     WW G+ F RILLDAPCSATGVIRRHPDIK  R+  DI  LA LQ ++LD  W
Sbjct: 300 ADARETAQWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIAALAALQGELLDALW 359

Query: 356 KWLKPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQAS------SQDIGWQIT 409
             L+ GG L+YATCS LP EN D I AFLART+ A+   +  QA        Q  G Q+ 
Sbjct: 360 PTLQVGGMLVYATCSTLPTENTDVIEAFLARTSGARELDIAGQAGQPPAGIKQAHGRQLL 419

Query: 410 PGQHNMDGFYYARLLK 425
             Q   DGFYYA+L+K
Sbjct: 420 AQQGGHDGFYYAKLIK 435