Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 391 a.a., fatty oxidation complex, beta subunit FadA from Pseudomonas stutzeri RCH2

 Score =  503 bits (1294), Expect = e-147
 Identities = 251/386 (65%), Positives = 307/386 (79%)

Query: 2   KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQT 61
           + AVIVD  RTPMGRSK G+ RN RAET+SA L+ G+L RNP++DP  +EDVIWGCV QT
Sbjct: 6   RDAVIVDFGRTPMGRSKGGMHRNTRAETMSAHLIDGVLARNPKIDPAEVEDVIWGCVNQT 65

Query: 62  LEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHM 121
           LEQG+NIAR ASL+  IP T+   TV+RLCGSSM A+H A +AI T  GD F+IGGVEHM
Sbjct: 66  LEQGWNIARMASLMTRIPHTSAGQTVSRLCGSSMSALHTAVQAIQTNNGDVFVIGGVEHM 125

Query: 122 GHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATI 181
           GHV M HGVD +P L+   AKASGMMGLTAEMLGK+HGITREQQDAF  RSH+ A+ AT+
Sbjct: 126 GHVSMMHGVDPNPQLSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGERSHRLAHKATL 185

Query: 182 EGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSAL 241
           EG F  EI  +EG+D  G L     DE IRP+TT+ESLA L+P F+P  GTVTAGTSS +
Sbjct: 186 EGNFKDEIIPMEGYDEDGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQI 245

Query: 242 SDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVND 301
           +DGAS M++M   +A+ LG+   A +R+MA+AG D AIMGYGPVP+TQK L RAG+T++D
Sbjct: 246 TDGASCMIVMSAQRAKDLGIQPLAVVRAMALAGVDPAIMGYGPVPSTQKVLKRAGLTMDD 305

Query: 302 LDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLME 361
           +  +ELNEAFAAQ+LP +KDL LLD ++EK+NL+GGAIALGHP GCSGARIS TL+N+M+
Sbjct: 306 ISHVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365

Query: 362 HKDATLGLATMCIGLGQGIATVFERV 387
             + T+G+ATMCIGLGQGI+TVFERV
Sbjct: 366 QNNGTIGVATMCIGLGQGISTVFERV 391