Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., 3-oxoadipyl-CoA thiolase from Ralstonia solanacearum IBSBF1503

 Score =  295 bits (756), Expect = 1e-84
 Identities = 186/404 (46%), Positives = 237/404 (58%), Gaps = 21/404 (5%)

Query: 1   MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQ 60
           M QA I D IRTP+GR   G    VRA+ L A  +K L+ RNP++D + I+DVI+GC  Q
Sbjct: 1   MTQAFICDAIRTPIGRY-GGSLSAVRADDLGAVPLKALMARNPRVDWSAIDDVIFGCANQ 59

Query: 61  TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH 120
             E   N+AR +SLLAG+P++    T+NRLCGS M+A   AARAI  G     I GGVE 
Sbjct: 60  AGEDNRNVARMSSLLAGLPQSVPGSTINRLCGSGMDATGTAARAIRAGETALMIAGGVES 119

Query: 121 MGHVPMNHG---------VDFHPG-----LANNVAKAS---GMMGLTAEMLGKLHGITRE 163
           M   P   G          D +         N + +A      M  TAE +   + + RE
Sbjct: 120 MSRAPFVMGKAASAFSRDADLYDTTIGWRFVNPLMQAQYGVDSMPETAENVATDYRVNRE 179

Query: 164 QQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLR 223
            QD FA+RS   A  A  +G  A+EI  +      GA I V +DE  R  TT+E LA L+
Sbjct: 180 DQDRFALRSQANAARAQADGTLAQEITPVTIAQKKGAPIVVDRDEHPRA-TTLELLAKLK 238

Query: 224 PVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYG 283
            V  P +GTVTAG +S ++DGA A+L+  E  A+  GL  RARI  MA AG    +MG G
Sbjct: 239 GVVRP-DGTVTAGNASGVNDGACALLLANEDAAKRFGLTPRARIVGMATAGVPPRVMGIG 297

Query: 284 PVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGH 343
           P PA+QK L + G+T++ +DVIELNEAFAAQ L   + LGL D  D ++N NGGAIALGH
Sbjct: 298 PAPASQKVLKQLGLTLDQMDVIELNEAFAAQGLAVTRQLGLAD-DDARVNPNGGAIALGH 356

Query: 344 PLGCSGARISTTLINLMEHKDATLGLATMCIGLGQGIATVFERV 387
           PLG SGAR+ TT +  ++       L TMCIG+GQGIA V ERV
Sbjct: 357 PLGMSGARLVTTAMYQLQRTGGRYALCTMCIGVGQGIALVIERV 400