Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 387 a.a., 3-ketoacyl-CoA thiolase (RefSeq) from Shewanella loihica PV-4

 Score =  706 bits (1822), Expect = 0.0
 Identities = 351/386 (90%), Positives = 373/386 (96%)

Query: 1   MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQ 60
           MKQAVIVDCIRTPMGRSKAGVFRN+RAE+LSAELMK LL+RNPQLDPNTIEDVIWGCVQQ
Sbjct: 1   MKQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQ 60

Query: 61  TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH 120
           TLEQGFNIARNA+LLAGIPK AGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFI+GGVEH
Sbjct: 61  TLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEH 120

Query: 121 MGHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAAT 180
           MGHVPMNHGVDFHPGLA NVAKASGMMGLTAEMLGK+HGITR+QQD FAVRSHQRA+AAT
Sbjct: 121 MGHVPMNHGVDFHPGLATNVAKASGMMGLTAEMLGKMHGITRQQQDEFAVRSHQRAHAAT 180

Query: 181 IEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSA 240
           +EGRFA EI+ IEGHDA GALIKV+ DEVIRPET++ESLA LRPVFDP NGTVTAGTSSA
Sbjct: 181 VEGRFANEIHAIEGHDANGALIKVMHDEVIRPETSLESLATLRPVFDPANGTVTAGTSSA 240

Query: 241 LSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVN 300
           LSDGASAML+MEE KA+ALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKAL RAG+T+N
Sbjct: 241 LSDGASAMLVMEEEKAKALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALQRAGLTMN 300

Query: 301 DLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
           D+D+IELNEAFAAQSLPCVKDLGL+D+VDEK+NLNGGAIALGHPLGCSGARISTTLINLM
Sbjct: 301 DIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360

Query: 361 EHKDATLGLATMCIGLGQGIATVFER 386
           E KDATLGLATMCIGLGQGIATVFER
Sbjct: 361 ESKDATLGLATMCIGLGQGIATVFER 386