Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) (from data) from Paraburkholderia bryophila 376MFSha3.1

 Score =  310 bits (793), Expect = 6e-89
 Identities = 189/404 (46%), Positives = 244/404 (60%), Gaps = 21/404 (5%)

Query: 1   MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQ 60
           M  A I D IRTP+GR   G  ++VRA+ L A  +K L+ RNP +D   ++DVI+GC  Q
Sbjct: 1   MNDAYICDAIRTPIGRY-GGALKDVRADDLGAVPIKALIERNPGVDWRAVDDVIYGCANQ 59

Query: 61  TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH 120
             E   N+AR ++LLAG+P  A   T+NRLCGS M+A+  AARAI  G     I GGVE 
Sbjct: 60  AGEDNRNVARMSALLAGLPADAPGATINRLCGSGMDAVGTAARAIKAGEAQLMIAGGVES 119

Query: 121 MGHVPMNHG---------VDFHPG-----LANNVAKAS---GMMGLTAEMLGKLHGITRE 163
           M   P   G          + H         N + K       M  TAE + +  GI+R 
Sbjct: 120 MTRAPFVMGKAASAFARQAEIHDTTIGWRFVNPLMKRQYGVDSMPETAENVAEQFGISRA 179

Query: 164 QQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLR 223
            QDAFA+ S Q+A  A  +G  A+EI G+E     G  I+V  DE  R ET++ESLA L+
Sbjct: 180 DQDAFALVSQQKAARAQRDGTLAQEIVGVEIAQKKGDAIRVTLDEHPR-ETSLESLAKLK 238

Query: 224 PVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYG 283
            V  P +GTVTAG +S ++DGA A+LI  +  A   GL  RAR+  MA AG +  IMG G
Sbjct: 239 GVVRP-DGTVTAGNASGVNDGACALLIASQQAADQYGLRRRARVVGMATAGVEPRIMGIG 297

Query: 284 PVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGH 343
           P PATQK L + G+T++ LDVIELNEAFA+Q L  ++ LGL D  D ++N NGGAIALGH
Sbjct: 298 PAPATQKLLRQLGMTLDQLDVIELNEAFASQGLAVLRMLGLRD-DDPRVNPNGGAIALGH 356

Query: 344 PLGCSGARISTTLINLMEHKDATLGLATMCIGLGQGIATVFERV 387
           PLG SGAR+ TT ++ +E  +    L TMCIG+GQGIA V ER+
Sbjct: 357 PLGASGARLVTTALHQLERSNGRFALCTMCIGVGQGIALVIERL 400