Pairwise Alignments

Query, 191 a.a., DNA-3-methyladenine glycosidase I (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 225 a.a., DNA-3-methyladenine glycosylase (EC 3.2.2.20) from Acidovorax sp. GW101-3H11

 Score =  157 bits (398), Expect = 1e-43
 Identities = 82/179 (45%), Positives = 110/179 (61%), Gaps = 2/179 (1%)

Query: 5   RCNWVSDDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAFAD 64
           RC W    PLYR YHD  WG PV D + LF K+CL+G Q+GLSW+TIL K++ +  AFA+
Sbjct: 31  RCTWCQATPLYRHYHDTEWGFPVADDRRLFEKICLEGFQSGLSWLTILNKREGFRAAFAN 90

Query: 65  FEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSF-VG 123
           F+   +A F  A VE L+ +  IVR+R KI S I NA   L    +    + + W +   
Sbjct: 91  FDAEQVAAFGPADVERLVQDAAIVRHRGKIESTINNACRVLELKREFGSLAHYAWRYEPA 150

Query: 124 GKPRVNQFT-SMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDC 181
              R  + T  +++  + +P S AMSK LKK G++FVGPT  YAFMQA+G+VNDHL  C
Sbjct: 151 AADRPERITREVARTLSTSPASIAMSKDLKKRGWSFVGPTTVYAFMQAMGLVNDHLEGC 209