Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 288 a.a., Predicted signal transduction protein from Pseudomonas fluorescens FW300-N1B4

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 10/176 (5%)

Query: 26  LELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALVQLGRE 85
           L++++ + DP  D + +  LI QDP LS  +LK+ NSP +    + +T++Q+A+  LG  
Sbjct: 29  LQMEQYMPDP--DLEVIAKLISQDPGLSGALLKIVNSPYYGLSNK-ITAIQRAVNLLGSR 85

Query: 86  QLRRFVTSSLVR-EMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDRDTAFLLGLLHD 144
            +   + +  ++ E+ D   +   RF       +M    LA  +  +  D A+ LGL HD
Sbjct: 86  SIINLINAQSIKGELNDDAIVTLNRFWDTAQDVAMTCLTLAKRVGVQAGDEAYALGLFHD 145

Query: 145 VGKLAIFKMLLDAFVQAEPGEQPNSWLFRQVMT------AKSLTLSALLAKHWQLP 194
            G   + K   D     E      S   R V T           +    AK W+LP
Sbjct: 146 CGIPLMIKKFPDYMKVLEQAYANASAECRVVDTENKKYNTNHAVVGYYTAKSWRLP 201