Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., putative signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 16  EKVLKLPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSL 75
           +++ +LP  + EL   + +     K +   +  DP+LS  VL+L NS  F    REV ++
Sbjct: 11  DELPRLPKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSARF-GCSREVGTI 69

Query: 76  QQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEE---D 132
             A+V+LG + LR  V +S V   +   P       A+ W ++ +VA +  EL++     
Sbjct: 70  DDAVVRLGMQTLRTLVIASAV---VGAVPKVEGFDLADFWGNTFEVAIICQELAKRLGTL 126

Query: 133 RDTAFLLGLLHDVGKLAIFK--MLLDAFVQAEPGEQPNSWLF-RQVMTAKSLTLSALLAK 189
            + AF  G+LH +G+L I      + A + A   +  +  L  ++++   +  + ALLA+
Sbjct: 127 PEEAFTCGILHSIGELLIVNGDPAVAATISAAVADGADRNLMEKELLGYDNAEIGALLAQ 186

Query: 190 HWQ 192
            W+
Sbjct: 187 SWK 189