Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 351 a.a., putative signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  332 bits (850), Expect = 9e-96
 Identities = 160/266 (60%), Positives = 215/266 (80%)

Query: 1   MAEIEQALASPQLIAEKVLKLPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLC 60
           +  +E ALA P++IAEKV KLP  ++ELD++LA+P+ DT++++ALI++DP+LS EV++LC
Sbjct: 84  IGNVESALADPKVIAEKVFKLPHDLIELDKQLANPEVDTEEVIALIKRDPVLSAEVIQLC 143

Query: 61  NSPAFKRGEREVTSLQQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQ 120
           N+PAF RG +++TSLQQA+V LGREQLRRFV++  VRE+++IKPIY+RRFGAE+WRHS+Q
Sbjct: 144 NAPAFHRGAKDITSLQQAVVILGREQLRRFVSAVKVREVVEIKPIYYRRFGAEVWRHSLQ 203

Query: 121 VAFLASELSEEDRDTAFLLGLLHDVGKLAIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKS 180
           VA+LA+EL+ ED+DTAF+LGL+HDVGK+AIF+MLL+AF +AEPGEQP SWLFRQVMT+KS
Sbjct: 204 VAYLAAELATEDQDTAFMLGLIHDVGKIAIFQMLLEAFAKAEPGEQPRSWLFRQVMTSKS 263

Query: 181 LTLSALLAKHWQLPSTFETELDKLAHVHTRPNEGIAAVVWRANVISEISMLQQASKLPAD 240
           L LSA+LA+ W LP  F   L  LA+    P E +   +W AN ISE SML QA++L   
Sbjct: 264 LILSAVLARSWLLPPLFSRSLAALANPDNMPTEPLPKAIWTANHISECSMLWQAARLKEP 323

Query: 241 MLSNLLALVGLEQAQFDELHEKLQQF 266
            L+ LLA +G+++  FD LHEKL  F
Sbjct: 324 QLNELLARIGMDRKTFDPLHEKLILF 349