Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., histidine kinase from Pseudomonas aeruginosa PA14

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 8/180 (4%)

Query: 22  PSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALVQ 81
           P  +++L  +   P  D K++  LI QDP LS  +LKL NSP F    R +TS+Q+A+  
Sbjct: 23  PQIMVDLQMEQVMPNPDLKNIARLISQDPGLSGALLKLVNSPFFGLANR-ITSIQRAVNL 81

Query: 82  LGREQLRRFVTSSLVR-EMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDRDTAFLLG 140
           LG   +   + +  ++ EM D   +   RF       +M    LA  +  E  D A+ LG
Sbjct: 82  LGSRSVINLINAQSIKGEMSDDTIVTLNRFWDTAQDVAMSCLSLAKRVGYESVDEAYALG 141

Query: 141 LLHDVG------KLAIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLP 194
           L H+ G      +   +  +L+    A   ++       +V+      +    A+ W+LP
Sbjct: 142 LFHNCGIPLMLKRFPHYMAVLEEAYAAASDKRRVVDTENRVLNTNHAVVGYYTARSWRLP 201