Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 21/261 (8%)

Query: 21  LPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALV 80
           +P  V E+     +     +++   +  D +LS ++L+L NS ++    R + ++  A++
Sbjct: 16  IPKVVQEVIESFNNESVSIEEIAKKLAADQVLSAKILRLANS-SYYHVSRTIGTVDDAVL 74

Query: 81  QLGREQLRRFVTSS-LVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDR---DTA 136
            LG   +R  V S+ +      +  +  + F    WR+S+  A +A  L++  +   D A
Sbjct: 75  MLGFMTVRTLVVSTGMAGSFKKLPGVDLKLF----WRYSLDTALVAKWLAKRGKLNSDFA 130

Query: 137 FLLGLLHDVGKLAIFKMLLDAFVQ----AEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQ 192
           F +GL+H +G+L +   + +  +Q    A P +     + R+        + A LA+ W+
Sbjct: 131 FTVGLMHAIGQLVMHAGMPEQALQVDKVAGPLDARRLDVERKSFGYDFADVGAELARRWR 190

Query: 193 LPSTFETELDKLAHVHTRPNEGIAAVV----WRANV-ISEISMLQQASKLPADMLSNL-- 245
            P  F   ++          +  AA+V    WRA    ++ S  + A+  PA++   L  
Sbjct: 191 FPDEFAKVIEAFPQPLQGEFDPFAAIVHLAAWRARAHENQYSDEELAATFPAEVAERLGV 250

Query: 246 -LALVGLEQAQFDELHEKLQQ 265
            L     E    +EL E +Q+
Sbjct: 251 RLETFTQEMPPLEELGEGMQE 271