Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., putative signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 14/241 (5%)

Query: 20  KLPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQAL 79
           +LP  + EL   + D     K++   +  DPL+S +VL+L N   +    REV S+ +A+
Sbjct: 15  RLPKAISELLEVVNDDNATVKNIATKVSHDPLISAKVLRLANCAHYGH-SREVGSIDEAV 73

Query: 80  VQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEE---DRDTA 136
           V+LG + LR  V +S V   +   P       A+ W  + ++A    E+++      D A
Sbjct: 74  VRLGMQTLRTLVLASAV---MGSVPKCQGVDLAQFWGQTFEIALYCQEMAKRCGVQPDEA 130

Query: 137 FLLGLLHDVGKL---AIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQL 193
           F  G+LH +G L   AI     +   +A    +      R+++   S  + ALLAK+W+ 
Sbjct: 131 FTCGILHRIGDLLIAAISPEDAEKITEAVAQGKDKHAFERELLGYDSPDIGALLAKNWKF 190

Query: 194 -PSTFETELDKLAHVHTRPNEGIAAVVWRA-NVISEISMLQQASKLPADMLSNLLALVGL 251
            P+  +  L +     + P   +AA++  A  V+ E   +    K     LS L    GL
Sbjct: 191 TPALVQGILYQDHPKDSNPFSKLAALLCLAYKVLEEWDSIDDDDK--TSWLSQLATKKGL 248

Query: 252 E 252
           +
Sbjct: 249 K 249