Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 457 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  848 bits (2190), Expect = 0.0
 Identities = 432/460 (93%), Positives = 442/460 (96%), Gaps = 3/460 (0%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN 60
           MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEM+GDTLVLYAPNRFVLDWVRDKYIN IN
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMEGDTLVLYAPNRFVLDWVRDKYINSIN 60

Query: 61  QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVGTAFNTTEPVANTN 120
           QFFTEQ+G++APKLRFDIGSRPSAK   PAP AAV+  +PQ K   G +F +    A +N
Sbjct: 61  QFFTEQLGDNAPKLRFDIGSRPSAKPQAPAP-AAVKAAAPQPKP--GNSFVSQPEPAVSN 117

Query: 121 HRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVGN 180
           HRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVGN
Sbjct: 118 HRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVGN 177

Query: 181 GIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQ 240
           GIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQ
Sbjct: 178 GIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQ 237

Query: 241 EEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILM 300
           EEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILM
Sbjct: 238 EEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILM 297

Query: 301 RKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLL 360
           RKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLL
Sbjct: 298 RKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLL 357

Query: 361 ALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEIGD 420
           ALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQ+AMALSKELTNQSLPEIGD
Sbjct: 358 ALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGD 417

Query: 421 AFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 460
           AFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS
Sbjct: 418 AFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 457