Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

 Score =  848 bits (2190), Expect = 0.0
 Identities = 427/461 (92%), Positives = 442/461 (95%), Gaps = 3/461 (0%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN 60
           MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDG+TLVLYAPNRFVLDWVRDKY+N IN
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60

Query: 61  QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVP-SPQTKASVGTAFNTTEPVANT 119
           QFFTEQMG+DAPKLRFDIGSRP++K    AP A+ + P +P  K+    +FN+ EP A  
Sbjct: 61  QFFTEQMGSDAPKLRFDIGSRPASKPA--APAASTKSPVAPAAKSPSKPSFNSNEPAATA 118

Query: 120 NHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVG 179
           NHRSN+NPTYQFDNFVEGKSNQLGKAAALQV+ENPGGAYNPLFLYGGTGLGKTHLLHAVG
Sbjct: 119 NHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVG 178

Query: 180 NGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRS 239
           NGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRS
Sbjct: 179 NGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRS 238

Query: 240 QEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAIL 299
           QEEFFHTFNALLEGNHQ+ILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAIL
Sbjct: 239 QEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAIL 298

Query: 300 MRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDL 359
           MRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDL
Sbjct: 299 MRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDL 358

Query: 360 LALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEIG 419
           LALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQ+AMALSKELTNQSLPEIG
Sbjct: 359 LALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIG 418

Query: 420 DAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 460
           DAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS
Sbjct: 419 DAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 459